I tried it on the .PE3 file, it still complain about the duplicate coil.
However, if you are using the WinTRiLOGI version 3.52 in E10 mode, then although the software will warn you of the duplicate coil, it gives you the option to override the warning and continue the compilation. Somehow in H-series mode that option to allow you to override it was not enabled. That's may be why you think that it allows compilation under E10 mode.